Convert FASTQ to FASTA format
meta
:map
Groovy Map containing sample information e.g. [ id:'test', single_end:false ]
[ id:'test', single_end:false ]
fastq
:file
Sequence file in fastq format
*.{fastq,fq}.gz
fasta
*.fa.gz
Sequence file in fasta format
*.{fasta,fa}.gz
versions_seqkit
${task.process}
:string
The name of the process
seqkit
The name of the tool
seqkit version | sed 's/^.*v//'
:eval
The expression to obtain the version of the tool
versions
Cross-platform and ultrafast toolkit for FASTA/Q file manipulation, written by Wei Shen.
