A module for concatenation of gzipped or uncompressed files
meta
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
files_in
:file
List of compressed / uncompressed files
*
file_out
Groovy Map containing sample information
${prefix}
Concatenated file. Will be gzipped if file_out ends with “.gz”
${file_out}
versions_cat
${task.process}
:string
The name of the process
pigz
The name of the tool
pigz --version 2>&1 | sed 's/pigz //g'
:eval
The expression to obtain the version of the tool
versions
Just concatenation
